BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H05LP1|AL429296
(1045 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1993 0.0
3x_Contig1624 228 1e-59
3x_Contig1263 226 6e-59
3x_Contig869 222 9e-58
3x_Contig1722 212 9e-55
>3x_Contig1503
Length = 10719
Score = 1993 bits (1004), Expect = 0.0
Identities = 1036/1044 (99%), Gaps = 3/1044 (0%)
Strand = Plus / Plus
Query: 1 actgagtataaggtcagtattagatattaaactggagcccttttaactcctccaagttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 actgagtataaggtcagtattagatattaaactggagcccttttaactcctccaagttga 2840
Query: 61 aatcagcggagagacacaaaacgttatctacaaaatgggggaaaagacagaaaccactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2841 aatcagcggagagacacaaaacgttatctacaaaatgggggaaaagacagacaccactat 2900
Query: 121 ttccactgaataccacaatattagttattatttgacaatgattccaattttaattgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 ttccactgaataccacaatattagttattatttgacaatgattccaattttaattgtaat 2960
Query: 181 tagagtgcaaaaggcaacaagattcggctaacttctcgaatgaaacgcgtctttaaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2961 tagagtgcaaaaggcaacaagattcggctaacttctcgaatgaaacgcgtctttaaccag 3020
Query: 241 tctctgtctttaaacaaaccagcgagtgttgcttgaagaagacttcttttaatagtaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 tctctgtctttaaacaaaccagcgagtgttgcttgaagaagacttcttttaatagtaaat 3080
Query: 301 ggagatttcgagtcgaaatctaaatcttgaacaaaagaaaaaaaatgcgataaaggctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3081 ggagatttcgagtcgaaatctaaatcttgaacaaaagaaaaaaaatgcgataaaggctgc 3140
Query: 361 agaaagataacgacagaaaacagtcgattgatccaccctatgttgctatattgtgtcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3141 agaaagataacgacagaaaacagtcgattgatccaccctatgttgctatattgtgtcaac 3200
Query: 421 aagctccgtagacacttacggagaaactatacaagtaaattacacactcaaagaaagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3201 aagctccgtagacacttacggagaaactatacaagtaaattacacactcaaagaaagcca 3260
Query: 481 tctgtgtctatcgcacaaatatatatcagctttgccatataaaccacatatatgcatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3261 tctgtgtctatcgcacaaatatatatcagctttgccatataaaccacatatatgcatctg 3320
Query: 541 ccatgatatggatagtacttgtggtcgatcatactgcttagggaaaagacataattttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3321 ccatgatatggatagtacttgtggtcgatcatactgcttagggaaaagacataattttcc 3380
Query: 601 cgtttcgtggaaaggctggttttgcagccgataccgtccacagtgaaggctgtgtgtgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3381 cgtttcgtggaaaggctggttttgcagccgataccgtccacagtgaaggctgtgtgtgtg 3440
Query: 661 gcctttctttctttctctttgtggcatagaagattcaaaaaaaaaaataagtctcccggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3441 gcctttctttctttctctttgtggcatagaagattcaaaaaaaaaaataagtctcccggg 3500
Query: 721 ggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttcaaattacagtct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3501 ggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttcaaattacagtct 3560
Query: 781 ggcgccttaaaccaacttggctaccgagaggagttacttggcttttggcatactacggag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3561 ggcgccttaaaccaacttggctaccgagaggagttacttggcttttggcatactacggag 3620
Query: 841 agttacattaggaagtacaagtcgcatggggaagaaagaattaggaaaaggtagaatgca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3621 agttacattaggaagtacaagtcgcatggggaagaaagaattaggaaaaggtagaatgca 3680
Query: 901 atgcaatgcaatgcaatcaagcggtggggaactacgaacagctartaccgttcgatggta 960
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 3681 atgcaatgcaatgcaatcaagcggtgggaaactacgaacagctagtaccgttcgatggta 3740
Query: 961 tcgcaggtgtctataccgacagttgttgcgtg-aaaamactgtttttctgggca-aaatt 1018
|||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||
Sbjct: 3741 tcgcaggtgtctataccgacagttgttgcgtgaaaaacactgtttttctggacagaaatt 3800
Query: 1019 catacaagg-ccgtgaatagctaa 1041
||||||||| ||||||||||||||
Sbjct: 3801 catacaaggcccgtgaatagctaa 3824
>3x_Contig1624
Length = 12551
Score = 228 bits (115), Expect = 1e-59
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 702 aaaaaataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttg 761
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5984 aaaaaaaaagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttg 6043
Query: 762 tgttttcaaattacagtctggcgccttaaaccaacttggctaccgagaggagttacttg 820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6044 tgttttcaaattacagtctggcgccttaaaccaacttggctaccgagaggagttacttg 6102
>3x_Contig1263
Length = 6840
Score = 226 bits (114), Expect = 6e-59
Identities = 120/122 (98%)
Strand = Plus / Minus
Query: 699 aaaaaaaaataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgct 758
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5589 aaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgct 5530
Query: 759 ttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagaggagttact 818
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5529 ttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagaagttact 5470
Query: 819 tg 820
||
Sbjct: 5469 tg 5468
>3x_Contig869
Length = 2873
Score = 222 bits (112), Expect = 9e-58
Identities = 115/116 (99%)
Strand = Plus / Minus
Query: 697 aaaaaaaaaaataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 756
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1976 aaaaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 1917
Query: 757 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagga 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1916 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagga 1861
>3x_Contig1722
Length = 17718
Score = 212 bits (107), Expect = 9e-55
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 697 aaaaaaaaaaataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 756
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5663 aaaaacaaaaagaagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 5722
Query: 757 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagg 811
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5723 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagg 5777
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,277
Number of Sequences: 1807
Number of extensions: 13277
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 5
length of query: 1045
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1029
effective length of database: 10,329,639
effective search space: 10629198531
effective search space used: 10629198531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)